Step 1 · Cohort intake & scoring

Cohort intake & scoring

Upload a de-identified mutation table, validate the schema, then rank mutation signals for expert research review.
Cohort: Lung adenocarcinoma·5 signals·5 genes
Review existing results

Research-use only. Expert review and retrospective validation are required.

Research workflow

Cohort intake & scoring

Five-step intake: select cohort, validate schema, configure scoring, run, then continue to evidence review.

Review evidence
1Run analysis
2Review evidence
3Export report
4Share client view

Intake stepper

5-step research workflow

Research-use only

  1. Step 1

    Select cohort

  2. Step 2

    Validate schema

  3. Step 3

    Configure scoring

  4. Step 4

    Run scoring

  5. Step 5

    Continue to evidence review

Schema validation

Required fields confirmed

Validated
  • De-identified rows (no patient identifiers)
  • Gene symbol present (HGNC)
  • Variant notation parseable
  • Pathway annotation mapped
  • Evidence category recognised
  • No prohibited fields detected

Last run

24m ago

Avg duration

89s

Success rate

50%

Mutations scored

5

Active cohort

Load demo cohort

Lung adenocarcinoma demo cohort

Run the complete local analysis workflow on a preloaded de-identified cohort, without external APIs.

Samples
48
Mutation signals
5
Genes detected
EGFR, TP53, KRAS, ALK, MET
View Ranked ResultsView Workflow

Analysis goals

  • Mutation relevance ranking
  • Cancer pathway mapping
  • Drug-repurposing hypothesis shortlist
  • Evidence provenance report

Ready for research analysis

Run history

Recent runs for this cohort

RunStartedDurationSignalsHypothesesStatusBy
run-2026-014224m ago168s155Completeamir.k@oncoq
run-2026-013922h ago9s00Failedsystem